taxonID	type	description	language	source
122A878DFFABC41CFCCAFA5AF5C1F9EF.taxon	description	Fixed differences were found between each of the investigated taxon pairs, even between the genetically distinct unit of the TrebiŠnjica River and the remaining species (Table 4). Moreover, within the Cytb gene, there are diagnostic sites for each Adriatic Squalius species (Table 5) that differentiate certain species from the remaining ones and enable its reliable molecular identification. On the other hand, only several population pairs share polymorphisms (one shared polymorphism in each taxon pair; Table 4): S. illyricus / S. svallize, S. illyricus / S. microlepis, S. illyricus / S. squalus and S. illyricus / S. sp. TrebiŠnjica. Of the six phylogenetic models compared using BFs, model E (identifying six Squalius species in the Adriatic basin and not recognizing S. janae nor the TrebiŠnjica lineage as separate species) is preferable over the remaining models (Table 6). The second-best model, based on BFs, is model B, which recognizes haplotypes from the TrebiŠnjica as a distinct taxonomic unit, but in which S. janae is not a valid species. Model A corresponds with the current taxonomy and RHOD MORPHOLOGICAL PERTINENCE LOCALITY DETERMINATION OF HAPLOTYPES OF SPECIES PER SPECIES Dragonja R. S. janae Unresolved; possibly Krka R. S. illyricus retention of ancestral Neretva Prološko R blato. S. svallize polymorphism S. microlepis Dragonja R. S. janae Neretva R. S. svallize / S. illyricus / Ravno S. squalus S. zrmanjae Konavočica R. S. svallize incomplete lineage Krka R. S. illyricus sorting Zrmanja R. S. zrmanjae Dragonja R. Pazinčica R. S. janae Mirna R. S. squalus S. squalus Krka R. S. svallize Trebišnjica R. S. illyricus Ravno S. microlepis Prološko blato S. tenellus Vrljika R. S. microlepis S. illyricus Ruda R. S. tenellus S. cephalus Krka R. S. illyricus (with distinct Drava R. S. cephalus haplotypes, but in unresolved polytomy) 1 change recognizes S. janae as a separate species, but was found to be the least likely in describing phylogenetic patterns and was overpowered by all the remaining models.	en	Buj, Ivana, Marčić, Zoran, Čavlović, Kristina, Ćaleta, Marko, Tutman, Pero, Zanella, Davor, Duplić, Aljoša, Raguž, Lucija, Ivić, Lucija, Horvatić, Sven, Mustafić, Perica (2020): Multilocus phylogenetic analysis helps to untangle the taxonomic puzzle of chubs (genus Squalius: Cypriniformes: Actinopteri) in the Adriatic basin of Croatia and Bosnia and Herzegovina. Zoological Journal of the Linnean Society 189 (3): 953-974, DOI: 10.1093/zoolinnean/zlz133, URL: https://academic.oup.com/zoolinnean/article/189/3/953/5666230
